The standalone Edit Annotations window is gone. In Edit PDF mode, clicking an annotation shows a compact property row under it: color (with color swatches), opacity, border, font, icon, line endings, contents that you edit inline, and Delete. A floating list shows the document’s annotations with a filter box, lets you select several (Shift/Ctrl+click), and has Delete, Discard changes and Save buttons. Ctrl + click an annotation to turn on Edit PDF mode and select it. The toggle command is now CmdToggleEditPDF.